Course: Science Cloud Summer School 2012
Abstract
The Science Cloud Summer School targets education and training of graduate students and the fostering of a community around a topic that has increasing interest and relevance: the use of cloud computing technologies in science - including infrastructure-as-a-service and platform-as-a-service. Because cloud computing systems and technologies provide a considerable departure from traditional models and evolve at a rapid pace, this event would provide a basis for students to immerse in a focused, intensive curriculum to learn fundamentals and experiment with these technologies in practice. We will cover topics of interest to students with both application and computer science focus.
- Official Tumblr Web Site
- Forum: http://archive.futuregrid.org/forums/fg-class-and-tutorial-forums/summer...
- FutureGrid Account Creation: http://archive.futuregrid.org/projects/241/register
- Participants: http://archive.futuregrid.org/projects/241/participants
- Videos: http://archive.futuregrid.org/gallery/sciencecloudsummerschool2012
For an alternative view without the boxes on the right see here.
Presentations from Day 1
Day 1: Monday July 30 INTRODUCTION | ||||
all day | Signing up for a FutureGrid Account
|
Gregor von Laszewski Fugang Wang Shariff Isalm Tak-lon Wu others TBD |
Indiana University | html [1] |
11:00am - 12:00pm | Introduction | Geoffrey Fox | Indiana University | PPTX [2] |
12:00pm - 1:00pm | Application: Biology on the Cloud | Michael Schatz | Cold Spring Harbor | PPT [3] |
1:00pm - 1:30pm | Infrastructure Used: FutureGrid | Geoffrey Fox | Indiana University | PPTX [4] |
1:30pm - 2:30pm | Lunch Break | |||
2:30pm - 3:30pm | Introduction to virtual high performance computing clusters | Thomas J. Hacker | Purdue University | PPTX [5] |
3:30pm - 4:30pm | Nimbus: Infrastructure Cloud Computing for Science
Resources used:
|
Kate Keahey | University of Chicago, Argonne National Laboratory |
PPTX [6] |
4:30pm - 5:00pm | Afternoon Break | |||
5:00pm - 5:45pm | Nimbus Infrastructure: Hands-on Using Infrastructure Clouds
Resources used:
|
John Bresnahan | University of Chicago, Argonne National Laboratory |
html [7] |
5:45pm - 6:45pm | Nimbus Platform: Managing Deployments in Multi-Cloud Environments
Resources used:
|
John Bresnahan, Mike Wilde, Kate Keahey |
University of Chicago, Argonne National Laboratory |
PPTX [8] |
6:45pm - 7:00pm | Wrap-Up Session |
Presentations from Day 2
Day 2: Tuesday July 31 | ||||
all day | Signing up for a FutureGrid Account
|
Gregor von Laszewski Fugang Wang Shariff Isalm Tak-lon Wu others TBD |
Indiana University | html [1] |
11:00am - 12:00pm | Running MapReduce in Non-Traditional Environments | Abhishek Chandra | University of Minnesota | PPTX [9] |
12:00pm - 1:30pm | Virtual Clusters Supporting MapReduce in Cloud
Lab Session: Reproducible Environment for Scientific Applications Resources used:
|
Jonathan Klinginsmith
Tak-Lon Wu |
Indiana University | PPTX [10] |
1:30pm - 2:30pm |
Lunch Break | |||
2:30pm - 4:30pm | MapReduce and NOSQL Cloud Storage
Resources used:
|
Jerome Mitchell, Xiaoming Gao | Indiana University | PPTX [13]
|
4:30pm - 5:00pm | Afternoon Break | |||
5:00pm - 7:00pm | Data Mining with Twister Iterative MapReduce | Judy Qiu | Indiana University | PPTX [16] PPTX [17] |
6:45pm - 7:00pm | Wrap-Up Session |
Presentations from Day 3
Day 3: August 1, ACADEMIC AND COMMERCIAL CLOUD INFRASTRUCTURE | ||||
all day | Signing up for a FutureGrid Account
|
Gregor von Laszewski Fugang Wang Shariff Isalm Tak-lon Wu others TBD |
Indiana University | html [1] |
11:00am - 1:00pm | Building Scalable Data Intensive Applications on the Cloud with Makeflow and WorkQueue | Douglas Thain | Notre Dame | html [18] |
1:00pm - 2:00pm | Lunch Break | |||
2:30pm - 3:30pm | Commercial IaaS/PaaS I: AWS for Scientists | Jamie Kinney | Amazon Web Services | PDF [19] |
3:30pm - 4:30pm | Commercial IaaS/PaaS II: Azure and Twister4Azure | Thilina Gunarathne | Indiana University | PPTX PPTX [20] |
4:30pm - 5:00pm | Afternoon Break | |||
5:00pm - 5:45pm | Networking and Clouds | Martin Swany | Indiana University | PDF [21] |
5:45pm - 6:45pm | IaaS in Action II: OpenStack, , Indiana University
IaaS in Action II: FutureGrid RAIN: Dynamic Provisioning on Bare Metal and IaaS in a Federated Cloud
|
Gregor von Laszewski, Javier Diaz | Indiana University | PPT [22] PPT [23] PPTX [24] |
6:45pm - 7:00pm | Wrap-Up Session |
Presentations from Day 4
Day 4: August 2, CYBERINFRASTRUCTURE/HPC AND CLOUDS: TECHNOLOGY AND APPLICATIONS | ||||
all day | Signing up for a FutureGrid Account
|
Gregor von Laszewski Fugang Wang Shariff Isalm Tak-lon Wu others TBD |
Indiana University | html [1] |
11:00am - 1:15pm | Federating HPC, Cyberinfrastructure and Clouds using CometCloud I
Resources used:
|
Manish Parashar | Rutgers University | HTML [25] |
1:15pm - 2:15pm | Lunch Break | |||
2:30pm - 4:15pm | Federating HPC, Cyberinfrastructure and Clouds using CometCloud II
Resources used:
|
Manish Parashar | Rutgers University | |
4:15pm - 4:45pm | Afternoon Break | |||
4:45pm - 5:45pm | Magellan: Evaluating Cloud Computing for Science | Lavanya Ramakrishnan | Lawrence Berkeley National Laboratory | PDF [26] |
5:45pm - 6:45pm | Scientific Workflows in the Cloud | Gideon Juve | USC | PPT [27] |
6:45pm - 7:00pm | Wrap-Up Session |
Presentations from Day 5
Day 5: August 3, EDUCATION APPLICATIONS AND ADVANCED TECHNOLOGY | ||||
all day | Signing up for a FutureGrid Account
|
Gregor von Laszewski Fugang Wang Shariff Isalm Tak-lon Wu others TBD |
Indiana University | html [1] |
11:00am - 12:00pm | Cloud Technology: Virtual Private Clusters: Virtual Appliances and Networks in the Cloud | Renato Figueiredo | University of Florida | PPT [28] |
12:00pm - 1:00pm | Applications of Cloud: DOE Systems Biology Knowledgebase | Rick Stevens | Argonne and University of Chicago | PPT [29] |
1:00pm - 1:30pm | Survey | |||
1:30pm - 2:30pm | Lunch Break | |||
2:30pm - 3:30pm | Cloud Technology: Cloud Security: New Challenges and New Opportunities | XiaoFeng Wang | Indiana University | PPTX [30] |
3:30pm - 4:30pm | Applications of Cloud: The iPlant Collaborative: Science in the Cloud for Plant Biology | Dan Stanzione | TACC | PDF [31] |
4:30pm - 5:00pm | Afternoon Break | |||
5:00pm - 5:45pm | Cloud Technology: GPU on Clouds | Andrew J. Younge | Indiana University | PPTX [32] |
5:45pm - 6:00pm | Wrap-Up Session |
References
- [fg-2063] von Laszewski, G., J. Bresnahan, and F. Wang,
"Signing up for a FutureGrid Account",
Science Cloud Summer School 2012, vol. 2012, no. 07/2012, Bloomington, FutureGrid Portal, 2012.
- [fg-2064] Fox, G.,
"Introduction",
Science Cloud Summer School 2012, Bloomington, IN, Indiana University, 07/2012.
- [fg-2065] Schatz, M.,
"Application: Biology on the Cloud",
Science Cloud Summer School 2012, Bloomington, IN, Cold Spring Harbor, 07/2012.
- [fg-2066] Fox, G.,
"Infrastructure Used: FutureGrid",
Science Cloud Summer School 2012, Bloomington, IN, Indiana University, 07/2012.
- [fg-2067] Hacker, T.,
"Introduction to virtual high performance computing clusters",
Science Cloud Summer School 2012, Bloomington, IN, Purdue University, 07/2012.
- [fg-2068] Bresnahan, J., and K. Keahey,
"Nimbus: Introduction to IaaS Cloud Computing for Science",
Science Cloud Summer School 2012, Bloomington, IN, University of Chicago/Argonne National Laboratory, 07/2012.
- [fg-2069] Bresnahan, J.,
"Nimbus Infrastructure: Hands-on Using IaaS Clouds",
Science Cloud Summer School 2012, Bloomington, IN, University of Chicago/Argonne National Laboratory, 07/2012.
- [fg-2070] Bresnahan, J., K. Keahey, and M. Wilde,
"Nimbus Platform: Managing Deployments in Multi-Cloud Environments",
Science Cloud Summer School 2012, Bloomington, IN, University of Chicago/Argonne National Laboratory, 07/2012.
- [fg-2071] Chandra, A.,
"Running MapReduce in Non-Traditional Environments",
Science Cloud Summer School 2012, Bloomington, IN, University of Minnesota, 07/2012.
- [fg-2072] Klinginsmith, J.,
"Virtual Clusters Supporting MapReduce in Cloud",
Science Cloud Summer School 2012, Bloomington, IN, Indiana University, 07/2012.
- [fg-2125] Wu, T. - L.,
Lab Session: Reproducible Environment for Scientific Applications,
, Bloomington, IN, 07/2012.
- [fg-2129] Wu, T. - L.,
"Tutorial: Reproducible Environment for Scientific Applications",
Science Cloud Summer School 2012, Bloomington, IN, Indiana University, 07/2012.
- [fg-2104] Mitchell, J.,
"Good Ole Hadoop! How We Love Thee!",
Virtual Cloud Summer School 2012, Bloomington, IN, Indiana University, 07/2012.
- [fg-2133] Li, H., and J. Qiu,
"Hands on Tutorial: Pig ",
Virtual Cloud Summer School 2012, Bloomington, IN, 07/2012.
- [fg-2110] Gunarathne, T., and H. Li,
"HBase Hands-on Prerequisites and Resources",
Virtual Cloud Summer School 2012, Bloomington, IN, Indiana University, 07/2012.
- [fg-2101] Li, H., and J. Qiu,
"High Level Language: Pig Latin",
Virtual Cloud Summer School 2012, Bloomington, IN, Indiana University, 07/2012.
- [fg-2112] Qiu, J., and B. Zhang,
Data Mining with Twister Iterative MapReduce,
, Submitted.
- [fg-2075] Thain, D.,
"Building Scalable Data Intensive Applications on the Cloud with Makeflow and WorkQueue",
Science Cloud Summer School 2012, Bloomington, IN, Notre Dame, 07/2012.
- [fg-2076] Kinney, J.,
"Commercial IaaS/PaaS I: AWS for Scientists",
Science Cloud Summer School 2012, Bloomington, IN, Amazon Web Services, 07/2012.
- [fg-2077] Gunarathne, T.,
"Commercial IaaS/PaaS II: Windows Azure and Twister4Azure",
Science Cloud Summer School 2012, Bloomington, IN, Indiana University, 07/2012.
- [fg-2078] Swany, M.,
"Networking and Clouds",
Science Cloud Summer School 2012, Bloomington, IN, Indiana University, 07/2012.
- [fg-2079] von Laszewski, G., and J. Diaz,
"IaaS in Action II: Eucalyptus OpenStack",
Science Cloud Summer School 2012, Bloomington, IN, Indiana University, 07/2012.
- [fg-2080] von Laszewski, G., and J. Diaz,
"IaaS in Action II: RAIN Dynamic Provisioning on Bare Metal and IaaS",
Science Cloud Summer School 2012, Bloomington, IN, Indiana University, 07/2012.
- [fg-2081] von Laszewski, G., and J. Diaz,
"IaaS in Action II: fg-move: Moving Resources Between Federated Clouds and Bare Metal",
Science Cloud Summer School 2012, Bloomington, IN, Indiana University, 07/2012.
- [fg-2082] Parashar, M., and M. AbdelBaky,
"Federating HPC, Cyberinfrastructure and Clouds using CometCloud",
Science Cloud Summer School 2012, Bloomington, IN, Rutgers University, 07/2012.
- [fg-2083] Ramakrishnan, L.,
"Magellan: Evaluating Cloud Computing for Science",
Science Cloud Summer School 2012, Bloomington, IN, Lawrence Berkeley National Laboratory, 07/2012.
- [fg-2084] Juve, G.,
"Scientific Workflows in the Cloud",
Science Cloud Summer School 2012, Bloomington, IN, USC, 07/2012.
- [fg-2085] Figueiredo, R.,
"Cloud Technology: Virtual Private Clusters: Virtual Appliances and Networks in the Cloud",
Science Cloud Summer School 2012, Bloomington, IN, University of Florida, 07/2012.
- [fg-2086] Stevens, R.,
"Applications of Cloud: DOE Systems Biology Knowledgebase",
Science Cloud Summer School 2012, Bloomington, IN, Argonne and University of Chicago, 07/2012.
- [fg-2087] Wang, X. F.,
"Cloud Technology: Cloud Security: New Challenges and New Opportunities",
Science Cloud Summer School 2012, Bloomington, IN, Indiana University, 07/2012.
- [fg-2088] Stanzione, D.,
"Applications of Cloud: The iPlant Collaborative: Science in the Cloud for Plant Biology",
Science Cloud Summer School 2012, Bloomington, IN, TACC, 07/2012.
- [fg-2089] Younge, A. J.,
"Cloud Technology: GPU on Clouds",
Science Cloud Summer School 2012, Bloomington, IN, Indiana University, 07/2012.
Intellectual Merit
This tutorial will educate members of the community.
Broader Impact
This tutorial will educate members of the community.
Use of FutureGrid
FutureGrid will be used to support the hands on sessions
Scale Of Use
Due to the many users we will focus on the start of many small environments. Users may have to team up into teams of two in case we have too many users.
Publications
- [fg-2133] Li, H., and J. Qiu, "Hands on Tutorial: Pig ", 07/2012
- [fg-2129] Wu, T. - L., "Tutorial: Reproducible Environment for Scientific Applications", Indiana University, 07/2012
- [fg-2125] Wu, T. - L., "Lab Session: Reproducible Environment for Scientific Applications", 07/2012
- [fg-2112] Qiu, J., and B. Zhang, "Data Mining with Twister Iterative MapReduce",
- [fg-2110] Gunarathne, T., and H. Li, "HBase Hands-on Prerequisites and Resources", Indiana University, 07/2012
- [fg-2104] Mitchell, J., "Good Ole Hadoop! How We Love Thee!", Indiana University, 07/2012
- [fg-2102] Klinginsmith, J., and T. - L. Wu, "Virtualbox Appliance Installation Guide",
- [fg-2101] Li, H., and J. Qiu, "High Level Language: Pig Latin", Indiana University, 07/2012
- [fg-2089] Younge, A. J., "Cloud Technology: GPU on Clouds", Indiana University, 07/2012
- [fg-2088] Stanzione, D., "Applications of Cloud: The iPlant Collaborative: Science in the Cloud for Plant Biology", TACC, 07/2012
- [fg-2087] Wang, X. F., "Cloud Technology: Cloud Security: New Challenges and New Opportunities", Indiana University, 07/2012
- [fg-2086] Stevens, R., "Applications of Cloud: DOE Systems Biology Knowledgebase", Argonne and University of Chicago, 07/2012
- [fg-2085] Figueiredo, R., "Cloud Technology: Virtual Private Clusters: Virtual Appliances and Networks in the Cloud", University of Florida, 07/2012
- [fg-2084] Juve, G., "Scientific Workflows in the Cloud", USC, 07/2012
- [fg-2083] Ramakrishnan, L., "Magellan: Evaluating Cloud Computing for Science", Lawrence Berkeley National Laboratory, 07/2012
- [fg-2082] Parashar, M., and M. AbdelBaky, "Federating HPC, Cyberinfrastructure and Clouds using CometCloud", Rutgers University, 07/2012
- [fg-2081] von Laszewski, G., and J. Diaz, "IaaS in Action II: fg-move: Moving Resources Between Federated Clouds and Bare Metal", Indiana University, 07/2012
- [fg-2080] von Laszewski, G., and J. Diaz, "IaaS in Action II: RAIN Dynamic Provisioning on Bare Metal and IaaS", Indiana University, 07/2012
- [fg-2079] von Laszewski, G., and J. Diaz, "IaaS in Action II: Eucalyptus OpenStack", Indiana University, 07/2012
- [fg-2078] Swany, M., "Networking and Clouds", Indiana University, 07/2012
- [fg-2077] Gunarathne, T., "Commercial IaaS/PaaS II: Windows Azure and Twister4Azure", Indiana University, 07/2012
- [fg-2076] Kinney, J., "Commercial IaaS/PaaS I: AWS for Scientists", Amazon Web Services, 07/2012
- [fg-2075] Thain, D., "Building Scalable Data Intensive Applications on the Cloud with Makeflow and WorkQueue", Notre Dame, 07/2012
- [fg-2074] Qiu, J., "Data Mining with Iterative MapReduce: Twister & Twister4Azure", Indiana University, 07/2012
- [fg-2073] Gao, X., H. Li, and T. Gunarathne, "MapReduce and NOSQL Cloud Storage", Indiana University, 07/2012
- [fg-2072] Klinginsmith, J., "Virtual Clusters Supporting MapReduce in Cloud", Indiana University, 07/2012
- [fg-2071] Chandra, A., "Running MapReduce in Non-Traditional Environments", University of Minnesota, 07/2012
- [fg-2070] Bresnahan, J., K. Keahey, and M. Wilde, "Nimbus Platform: Managing Deployments in Multi-Cloud Environments", University of Chicago/Argonne National Laboratory, 07/2012
- [fg-2069] Bresnahan, J., "Nimbus Infrastructure: Hands-on Using IaaS Clouds", University of Chicago/Argonne National Laboratory, 07/2012
- [fg-2068] Bresnahan, J., and K. Keahey, "Nimbus: Introduction to IaaS Cloud Computing for Science", University of Chicago/Argonne National Laboratory, 07/2012
- [fg-2067] Hacker, T., "Introduction to virtual high performance computing clusters", Purdue University, 07/2012
- [fg-2066] Fox, G., "Infrastructure Used: FutureGrid", Indiana University, 07/2012
- [fg-2065] Schatz, M., "Application: Biology on the Cloud", Cold Spring Harbor, 07/2012
- [fg-2064] Fox, G., "Introduction", Indiana University, 07/2012
- [fg-2063] von Laszewski, G., J. Bresnahan, and F. Wang, "Signing up for a FutureGrid Account", FutureGrid Portal,
- [fg-2049] "Public Forum for the Summer School 2012",
- [fg-2044] "Agenda for the Science Cloud Summer School 2012",