Annotation of High-Throughput Transcriptome Data
Project Information
- Discipline
- Biology (603)
- Orientation
- Research
PI will assemble data to produce thousands of gene sequences and develop/implement an approach to systematically annotate these genes based on their similarity to other known genese.
Intellectual MeritClassification of new genome.
Broader ImpactsClassification of new genome.
Project Contact
- Project Lead
- Katherine Holcomb (kholcomb)
- Project Manager
- Katherine Holcomb (kholcomb)
Resource Requirements
- Hardware System
-
- I don't care (what I really need is a software environment and I don't care where it runs)
Using Genesis II software already configured on FutureGrid resources to perform computation.
Scale of UseSeveral runs of 400-500 jobs per run, each taking approximately 2 hours.
Project Timeline
- Submitted
- 03/24/2011 - 11:39