Annotation of High-Throughput Transcriptome Data

Abstract

PI will assemble data to produce thousands of gene sequences and develop/implement an approach to systematically annotate these genes based on their similarity to other known genese.

Intellectual Merit

Classification of new genome.

Broader Impact

Classification of new genome.

Use of FutureGrid

Using Genesis II software already configured on FutureGrid resources to perform computation.

Scale Of Use

Several runs of 400-500 jobs per run, each taking approximately 2 hours.

Publications


FG-101
Katherine Holcomb
University of Virginia
Active

Keywords

gene sequencing, genesis ii, high-throughput computing

Timeline

3 years 20 weeks ago