Genetic Analysis of Metapopulation Processes in the Silene-Microbotryum Host-Pathogen System

Abstract

The purpose of this project is to utilize high-throughput computing to conduct statistical genetic analysis on metapopulation dynamics of the invasive plant, Silene latifolia. The programs were not coded in his lab. He requested the help of UVa Alliance for Computational Science and Engineering (UVACSE) in in running his analyses.

Intellectual Merit

Genetic analysis

Broader Impact

Genetic analysis

Use of FutureGrid

Using Genesis II software already configured on FutureGrid resources to perform computation

Scale Of Use

Several runs of 100 jobs per run, each taking approximately 2 hours

Publications


FG-102
Katherine Holcomb
University of Virginia
Active

Keywords

gene suquencing, genesis ii, high throughput computing

Timeline

3 years 20 weeks ago