Biblio

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[fg-1979] Kim, J., S. Maddineni, and S. Jha, "Characterizing Deep Sequencing Analytics using BFAST: Towards a Scalable Distributed Architecture for Next-Generation Sequencing Data", The Second International Workshop on Emerging Computational Methods for the Life Sciences, 06/2011.
[fg-2076] Kinney, J., "Commercial IaaS/PaaS I: AWS for Scientists", Science Cloud Summer School 2012, Bloomington, IN, Amazon Web Services, 07/2012.
[fg-2072] Klinginsmith, J., "Virtual Clusters Supporting MapReduce in Cloud", Science Cloud Summer School 2012, Bloomington, IN, Indiana University, 07/2012.
[fg-2292] Klinginsmith, J., M. Mahoui, and Y. M. Wu, "Towards Reproducible eScience in the Cloud", Cloud Computing Technology and Science (CloudCom), 2011 IEEE Third International Conference on, Athens, pp. 582-586, November, 2011. Abstract
[fg-1316] Klinginsmith, J., M. Mahoui, and Y. M. Wu, "Towards Reproducible eScience in the Cloud", IEEE International Conference on Cloud Computing Technology and Science, 07/2011.
[fg-1361] Klinginsmith, J., M. Mahoui, and Y. M. Wu, "Towards Reproducible eScience in the Cloud", CloudCom2011, Athens, Greece, IEEE, 12/2011.
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[10.1371/journal.pcbi.1002950] Larsson, P., and P. M. Kasson, "Lipid Tail Protrusion in Simulations Predicts Fusogenic Activity of Influenza Fusion Peptide Mutants and Conformational Models", PLoS Comput Biol, vol. 9, no. 3: Public Library of Science, pp. e1002950, 03, 2013. Abstract  Download: journal.pcbi_.1002950.pdf (1022.66 KB)
[fg-1013] von Laszewski, G., L. Wang, F. Wang, G. C. Fox, and G. K. Mahinthakumar, "Threat Detection in Urban Water Distribution Systems with Simulations Conducted in Grids and Clouds", The Second International Conference on Parallel, Distributed, Grid and Cloud Computing for Engineering, Ajaccio - Corsica - France, Civil-Comp Press, 04/2011.
[fg-ccgrid2011-tutorial] von Laszewski, G., A. J. Younge, and P. Marshall, FutureGrid CCGrid2011 Tutorial, , Newport Beach, CA, IEEE, 05/2011.
[fg-653] von Laszewski, G., FutureGrid Software Architecture, , FutureGrid All Hands Meeting at the IUPUI Conference Center: Indianapolis, IN USA, 10/2009.
[fg-1058] von Laszewski, G., A. J. Younge, A. Kulshrestha, F. Wang, and G. C. Fox, Rain: Dynamically Provisioning Clouds within FutureGrid, , A slightly modified version was presented as poster at SC10 and CloudCom10, 2010.
[fg-1050] von Laszewski, G., and others, FutureGrid User Manual, , update, Web Page, 04/2011.
[fg-2063] von Laszewski, G., J. Bresnahan, and F. Wang, "Signing up for a FutureGrid Account", Science Cloud Summer School 2012, vol. 2012, no. 07/2012, Bloomington, FutureGrid Portal, 2012.
[fg-2079] von Laszewski, G., and J. Diaz, "IaaS in Action II: Eucalyptus OpenStack", Science Cloud Summer School 2012, Bloomington, IN, Indiana University, 07/2012.  Download: OpenStackTutorial_slides.ppt (2.1 MB)
[fg-tutorial-cloudcom-2010] von Laszewski, G., G. Pike, A. Kulshrestha, A. J. Younge, and F. Wang, "FutureGrid Tutorial", CloudCom 2010, Indianapolis, IEEE, 12/2010.
[fg-1060] von Laszewski, G., and F. Wang, FuturegGrid Software: Portal Development, , Bloomington, IN, Indiana University, 04/2011.
[fg-2080] von Laszewski, G., and J. Diaz, "IaaS in Action II: RAIN Dynamic Provisioning on Bare Metal and IaaS", Science Cloud Summer School 2012, Bloomington, IN, Indiana University, 07/2012.  Download: RainTutorial_slides.ppt (4.35 MB)
[fg-648] von Laszewski, G., FutureGrid and Green Aware Computing Keynote Address, , 3rd International Conference on Network & System Security (NSS 2009), 10/2009.
[fg-2045] von Laszewski, G., H. Lee, J. Diaz, F. Wang, K. Tanaka, S. Karavinkoppa, G. C. Fox, and T. Furlani, "Design of a Dynamic Provisioning System for a Federated Cloud and Bare-metal Environment", Workshop on Cloud Services, Federation, and the 8th Open Cirrus Summit, San Jose, CA, IEEE, 09/2012.  Download: vonLaszewski-federated-cloud-07-14-2012.pdf (1.06 MB)
[fg-276-cloud] von Laszewski, G., Cloud Computing for K-12, , Purdue University, 10/2012.  Download: Cloud Computing for K-12-oct-5.pptx (48.07 MB)
[fg-2583] von Laszewski, G., and G. C. Fox, FutureGrid UAB Meeting, , XSEDE13 San Diego, CA, 7/24/2013.  Download: FG-XSEDE13-July24-2013.pptx (2.09 MB)
[fg-131] von Laszewski, G., Future Grid Software Architecture, , Bloomington, IN, Indiana University, 2009.
[fg-2081] von Laszewski, G., and J. Diaz, "IaaS in Action II: fg-move: Moving Resources Between Federated Clouds and Bare Metal", Science Cloud Summer School 2012, Bloomington, IN, Indiana University, 07/2012.  Download: MoveTutorial_slides.pptx (2.52 MB)
[fg-1933] von Laszewski, G., J. Diaz, F. Wang, and G. Fox, "Comparison of Multiple Cloud Frameworks", IEEE CLOUD 2012, 5th International Conference on Cloud Computing, Honolulu, Hawaii, IEEE, 06/2012.  Download: laszewski-IEEECloud2012_id-4803.pdf (603.3 KB)
[fg-646] von Laszewski, G., FutureGrid and Green Aware Computing, , Northern Illinois University, 10/2009.
[fg-1909] Lee, K., D. I. Wolinsky, and R. Figueiredo, "PonD : Dynamic Creation of HTC Pool on Demand Using a Decentralized Resource Discovery System", Proceedings of the 21st international symposium on High Performance Distributed Computing (HPDC), Delft, the Netherlands, ACM, 06/2012.
[fg-2208] Lee, K., T. Choi, P. O. Boykin, and R. J. Figueiredo, "MatchTree: Flexible, Scalable, and Fault-tolerant Wide-area Resource Discovery with Distributed Matchmaking and Aggregation", Future Generation Computer Systems, vol. to be published , issue to be published , to be published , 2012.
[fg-2133] Li, H., and J. Qiu, "Hands on Tutorial: Pig ", Virtual Cloud Summer School 2012, Bloomington, IN, 07/2012.
[fg-2101] Li, H., and J. Qiu, "High Level Language: Pig Latin", Virtual Cloud Summer School 2012, Bloomington, IN, Indiana University, 07/2012.
[Loffler:2011:UTT:2016741.2016800] Löffler, F., G. Allen, W. Benger, A. Hutanu, S. Jha, and E. Schnetter, "Using the TeraGrid to teach scientific computing", Proceedings of the 2011 TeraGrid Conference: Extreme Digital Discovery, New York, NY, USA, ACM, pp. 55:1–55:7, 2011. Abstract
[Loffler:2011:UTT:2016741.2016800] Löffler, F., G. Allen, W. Benger, A. Hutanu, S. Jha, and E. Schnetter, "Using the TeraGrid to teach scientific computing", Proceedings of the 2011 TeraGrid Conference: Extreme Digital Discovery, New York, NY, USA, ACM, pp. 55:1–55:7, 07/2011.
[fg-1976] Luckow, A., L. Lacinski, and S. Jha, "SAGA BigJob: An Extensible and Interoperable Pilot-Job Abstraction for Distributed Applications and Systems", 10th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing, 2010.
[fg-1977] Luckow, A., and S. Jha, "Abstractions for Loosely-Coupled and Ensemble-Based Simulations on Azure", IEEE International Conference on Cloud Computing Technology and Science, 2010.
[fg-1232] Luszczek, P., E. Meek, S. Moore, D. Terpstra, V. M. Weaver, and J. Dongarra, "Evaluation of the HPC Challenge Benchmarks in Virtualized Environments", VHPC 2011, 6th Workshop on Virtualization in High-Performance Cloud Computing, Bordeaux, France, 08/2011.  Download: Evaluartion of the HPC Challenge Benchmarks in Virtualized Environments.pdf (229.51 KB)
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[Marathe:2013:CSH:2493123.2462919] Marathe, A., R. Harris, D. K. Lowenthal, B. R. de Supinski, B. Rountree, M. Schulz, and X. Yuan, "A comparative study of high-performance computing on the cloud", Proceedings of the 22nd international symposium on High-performance parallel and distributed computing, New York, NY, USA, ACM, pp. 239–250, 2013.  Download: cloud-final.pdf (194.15 KB)
[fg-2207] Matsunaga, A., M. Tsugawa, and J. Fortes, Scaling-out CloudBLAST: Combining Technologies to BLAST on the Sky, , The Third IEEE International Scalable Computing Challenge (SCALE 2010), Melbourne, Australia, 2010. Abstract
[fg-2104] Mitchell, J., "Good Ole Hadoop! How We Love Thee!", Virtual Cloud Summer School 2012, Bloomington, IN, Indiana University, 07/2012.  Download: good_ole_hadoop.pptx (49.59 MB)
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[fg-2082] Parashar, M., and M. AbdelBaky, "Federating HPC, Cyberinfrastructure and Clouds using CometCloud", Science Cloud Summer School 2012, Bloomington, IN, Rutgers University, 07/2012.  Download: 1.introduction.pdf (1.51 MB); 2.cometcloud.masterworker.pdf (960.79 KB); 3.hands_on.pdf (455.36 KB); 4.cometcloud.mapreduce.pdf (648.24 KB); comet.xml (1.05 KB); CometCloud developer guide.pdf (129.23 KB); CometCloud installation guide-matrixmultiplication.pdf (137.91 KB); CometCloud installation guide-sample.pdf (121.87 KB)
[fg-1916] Peluso, S., P. Ruivo, P. Romano, F. Quaglia, and L. Rodrigues, "When Scalability Meets Consistency: Genuine Multiversion Update-Serializable Partial Data Replication", The 32nd International Conference on Distributed Computing Systems, Macau, China, IEEE, 06/2012.
[fg-652] Pierce, M., FutureGrid User Portal, , FutureGrid All Hands Meeting at the IUPUI Conference Center: Indianapolis, IN USA, 10/2009.
[fg-2762] Prathibha, S., "Monitoring the Performance Analysis Of Executing Workflow applications with different resource types in a cloud environment,", 1st International Symposium on Big Data and Cloud Computing Challenges(ISBCC-2014), VIT University, Chennai, India, March 27-28,2013.  Download: soma.pdf (408.18 KB)
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[fg-634] Qiu, J., SALSA Laboratory Work on FutureGrid, , User Advisory Board at TG'10, 08/2010.
[fg-626] Qiu, J., Scalable Programming and Algorithms for Data Intensive Life Science Applications, , NSF Data-Intensive Sciences Workshop: Seattle, WA, 09/2010.
[fg-2074] Qiu, J., "Data Mining with Iterative MapReduce: Twister & Twister4Azure", Science Cloud Summer School 2012, Bloomington, IN, Indiana University, 07/2012.
R
[fg-2083] Ramakrishnan, L., "Magellan: Evaluating Cloud Computing for Science", Science Cloud Summer School 2012, Bloomington, IN, Lawrence Berkeley National Laboratory, 07/2012.  Download: Magellan.pdf (4.74 MB)
[ruan2012dacidr] Ruan, Y., S. Ekanayake, M. Rho, H. Tang, S. - H. Bae, J. Qiu, and G. Fox, "DACIDR: deterministic annealed clustering with interpolative dimension reduction using a large collection of 16S rRNA sequences", Proceedings of the ACM Conference on Bioinformatics, Computational Biology and Biomedicine: ACM, pp. 329–336, 2012.
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[fg-2695] S, S., and A. Basu, "Performance of Eucalyptus and OpenStack Clouds on FutureGrid", International Journal of Computer Applications, vol. 80, issue 13, pp. 31 - 37, 10/2013.
[fg-2065] Schatz, M., "Application: Biology on the Cloud", Science Cloud Summer School 2012, Bloomington, IN, Cold Spring Harbor, 07/2012.
[fg-2833] de Silva, R. F., W. Chen, G. Juve, K. vahi, and E. Deelman, "Community Resources for Enabling Research in Distributed Scientific Workflows", the 10th IEEE International Conference on eScience 2014 (eScience 2014), Guaruja, SP, Brazil, Oct 20-24, 2014.  Download: communityresources-weiweichen.pdf (421.05 KB)
[10] Smith, E. D., "IU gets $10.1M grant to develop supercomputer network", The Indianapolis Star, Indianapolis, IN, 09/10/2009.
[fg-2088] Stanzione, D., "Applications of Cloud: The iPlant Collaborative: Science in the Cloud for Plant Biology", Science Cloud Summer School 2012, Bloomington, IN, TACC, 07/2012.  Download: VSCSE_iPlant_Stanzione_Aug_2012.pdf (14.55 MB)
[fg-2086] Stevens, R., "Applications of Cloud: DOE Systems Biology Knowledgebase", Science Cloud Summer School 2012, Bloomington, IN, Argonne and University of Chicago, 07/2012.  Download: Summer-School-2012.ppt (42.12 MB)
[fg-647] Stewart, C., FutureGrid: An Experimental, High-Performance Grid Testbed, , National Center for Supercomputing Applications at Urbana-Champaign, IL USA, 10/2009.
[fg-2078] Swany, M., "Networking and Clouds", Science Cloud Summer School 2012, Bloomington, IN, Indiana University, 07/2012.  Download: cloud-network-swany.pdf (393.51 KB)
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