Using Various Cloud Frameworks for Bioinformatics Application

Abstract

Take advantages of Cloud Computing to accelerate large-scale Bioinformatics data processing. Also evaluate the performance and efficiency of different MapReduce frameworks.

Intellectual Merit

Analyze bioinformatic data. Also analyze performance for different applications on different frameworks.

Broader Impact

We analyze the results of different applications, trying to provide recommendation and guidance for Bioinformatic applications. Also provide feedback for each framework used.

Use of FutureGrid

FutureGrid is the primary testbed for this project.

Scale Of Use

33 nodes(VMs)

Publications


FG-96
Yuduo Zhou
Indiana University
Active

Keywords

bioinformatics, cloud computing, gene, pair-wise distance

Timeline

3 years 32 weeks ago